miRPin: microRNA Protein Interactome

Exctracellular miRNA-protein interaction dataset curated using publicaly available resources.

 

Authors

Vishal Kumar Sahu1, Subhayan Sur1, Sanjana Agarwal1,  Harish Madhyastha2, Amit Ranjan1**, Soumya Basu1*

  1. Cancer and Translational Research Centre, Dr. D. Y. Patil Biotechnology and Bioinformatics Institute, Dr. D. Y. Patil Vidyapeeth, Tathawade, Pune - 411033, India
  2. Department of Cardiovascular Physiology, Faculty of Medicine, University of Miyazaki, Miyazaki 8891692, Japan

 

 

Supplementary Files

(Available on request or login)

  1. Supplementary File 1: Table of extracellular proteins
  2. Supplementary File 2: Table of extracellular miRNAs
  3. Supplementary File 3: Table of extracellular interactions
  4. Supplementary File 4: Table of Protein GSEA
  5. Supplementary File 5: Table of miRNA GSEA
  6. Supplementary File 6: Table of discovered MEME motifs
  7. Supplementary File 7: Molecular docking results
     

Acknowledgements

Authors acknowledge Dr. D. Y. Patil Biotechnology and Bioinformatics Institute, Pune, India for research infrastructure and the Department of Science & Technology (DST), Government of India for providing DST-FIST grant (SR/FST/LS-I/2017/70) to support research infrastructure and instruments. VKS acknowledges the Council of Scientific and Industrial Research (CSIR), New Delhi, India for CSIR-SRF fellowship (File No.: 09/1340(11487)/2021-EMR-I). SS acknowledges Department of Biotechnology, Government of India for Ramalingaswami Re-entry Fellowship grant (File No.: BT/RLF/Re-entry/47/2021). SB acknowledges intramural grant Intramural of Dr. D. Y. Patil Vidyapeeth (DPU), Pune, India (DPU/644-43/2021).